BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A11SP1|AL427250
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1583 1760 0.0
>3x_Contig1583
Length = 12509
Score = 1760 bits (885), Expect = 0.0
Identities = 888/891 (99%)
Strand = Plus / Plus
Query: 1 gatccatataggcttgatgatttggacacatattctaacgtattgtatgtcctgcaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6407 gatccatataggcttgatgatttggacacatattctaacgtattgtatgtcctgcaaaaa 6466
Query: 61 ccttataaactcgcatacttggcacaatatgctgcgaatgttgacatatatagaccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6467 ccttataaactcgcatacttggcacaatatgctgcgaatgttgacatatatagaccagaa 6526
Query: 121 acatgttgcataattgccaattactttagttcaaaacaacagcatgaaaaatctatccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6527 acatgttgcataattgccaattactttagttcaaaacaacagcatgaaaaatctatccta 6586
Query: 181 tattttagaagagcattaatgcttgataaatcttacactcatgcctggmtcttgatgggg 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6587 tattttagaagagcattaatgcttgataaatcttacactcatgcctggatcttgatgggg 6646
Query: 241 catgagttcatcgagatgaaaaactcacatgctgccattgaatgctatagaagagcttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6647 catgagttcatcgagatgaaaaactcacatgctgccattgaatgctatagaagagcttcc 6706
Query: 301 gatgtgaacccaagagatttccaggcttggtacggattaggacaagcatatgaagtttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6707 gatgtgaacccaagagatttccaggcttggtacggattaggacaagcatatgaagtttta 6766
Query: 361 gataaacattcctttgctttgtactatttccaaaaggcatgcgctttgaagccattggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6767 gataaacattcctttgctttgtactatttccaaaaggcatgcgctttgaagccattggat 6826
Query: 421 aamagaatgtggtttgcgtctgcatcctgttacgaaaaattagataamacggtacaagca 480
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6827 aaaagaatgtggtttgcgtctgcatcctgttacgaaaaattagataaaacggtacaagca 6886
Query: 481 atcaagtgtttccagcgttcatcccaattatcaggtgaacaggatatatctattctttac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6887 atcaagtgtttccagcgttcatcccaattatcaggtgaacaggatatatctattctttac 6946
Query: 541 aggttggcaaagctacatgaaaagaacaacgacgtttcatcttgtaaacattatatggcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6947 aggttggcaaagctacatgaaaagaacaacgacgtttcatcttgtaaacattatatggcc 7006
Query: 601 aagtgcgttgaacttgatgaggttaagaaggctcaacaaatagacgaaattggcaaagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7007 aagtgcgttgaacttgatgaggttaagaaggctcaacaaatagacgaaattggcaaagct 7066
Query: 661 aaactctggctcgcgaaacatgaatttaaacacagaaactattcagatgcttacaactat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7067 aaactctggctcgcgaaacatgaatttaaacacagaaactattcagatgcttacaactat 7126
Query: 721 gcaaatggtgttatacacggtacttctcaggagattgaagaagcaagggcaattctggca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7127 gcaaatggtgttatacacggtacttctcaggagattgaagaagcaagggcaattctggca 7186
Query: 781 gaatgtaggaaacgtatagatatttaattatttaatcttcaaggtagcataaatttacac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7187 gaatgtaggaaacgtatagatatttaattatttaatcttcaaggtagcataaatttacac 7246
Query: 841 aattgagttatgacaacatttggacatttaaggtgactttgtatacccaaa 891
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7247 aattgagttatgacaacatttggacatttaaggtgactttgtatacccaaa 7297
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6199
Number of Sequences: 1807
Number of extensions: 6199
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)